U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX012793: Geomyces destructans Genome Sequencing
1 LS454 (454 GS FLX Titanium) run: 16,045 spots, 4M bases, 12.4Mb downloads

UUID: cff5da42-6bef-4c66-845b-7686ce791483
Design: high coverage of the genome using 8kb jumps on 454
Submitted by: Broad Institute (BI)
Study: WGS sequencing
PRJNA39257 • SRP001346 • All experiments • All runs
show Abstracthide Abstract
The <a href="http://www.broad.mit.edu">Broad Institute</a> is sequencing the <i>Geomyces destructans</i> isolate 20631-21 genome at approximately 10X coverage using whole genome shotgun (WGS) sequencing.
Sample: unidentified organism
SAMN00009845 • SRS024887 • All experiments • All runs
Organism: unidentified
Library:
Name: 454-4591
Instrument: 454 GS FLX Titanium
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
          barcode
Group tagBasecalls
AccraAGTCGAC
BissauCCAGGAC
12  forward           reverse

Experiment attributes: (show all 6 attributes...) (hide...)
analysis_type: Standard 454 Base Calling and Alignment
gssr_id: 43393.1
lsid: BROAD:SEQUENCING_SAMPLE:43393.1
material_type: Genomic DNA
project: G2257
work_request: 21045
Pipeline: show...hide...
NameStepProgramVersion
base caller2010-05-19 07:25:58.0454BaseCaller2.3
Runs: 1 run, 16,045 spots, 4M bases, 12.4Mb
Run# of Spots# of BasesSizePublished
SRR15630716,0454M12.4Mb2011-03-31

ID:
13107

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...